Eames M and Kortemme T. Structural Mapping of Protein Interactions Reveals Differences in Evolutionary Pressures Correlated to mRNA Level and Protein Abundance. (2007). Structure 15, 1442-1451. (pdf)
Humphris EL and Kortemme T. Design of multi-specificity in protein interfaces. (2007). PLoS Comput Biol. 3(8): 1591-1604. (pdf)
Kortemme T, LA Joachimiak, AN Bullock, AD Schuler, BL Stoddard and D Baker (2004). Computational redesign of protein-protein interaction specificity. Nat Struct Mol Biol 11(4): 371-9.
Kortemme T and D Baker (2002). A simple physical model for binding energy hot spots in protein-protein complexes. Proc Natl Acad Sci U S A 99(22): 14116-21.
Kortemme, T. and D. Baker (2004). Computational design of protein-protein interactions. Curr Opin Chem Biol 8(1): 91-7. (review)